Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015879422.1_cds_XP_016437155.1_32941
CDS Infomation

[gene=LOC107763201] [db_xref=GeneID:107763201] [protein=serine carboxypeptidase-like] [protein_id=XP_016437155.1] [location=complement(join(12344..12472,12551..12684,12769..13027,13304..13395,13585..13735,13812..13955,15953..16072,17252..17420,18788..19104))] [gbkey=CDS]
Sequence

ATGGCGCAAATGAAGCTTTCACTTTCCCTTTTTCTCTCTCTTGTTCTTCTCCTTGCTTTT
TCTCCTTCTTCATTCGCGAAGGTTTCAATATCTTCGAAGTTAGCATCGAAGCAAGCTGAG
AAGTTGATACACGAGCTAAATTTGTTCCCGAAAGAATCCGATAACATTGTCGATCGGGAT
CCATTTCCCACCGCTGCTTCTAGAATCGTCGAGAAGCGATTTAATTTCGCTAATTTGACG
AATTCGAGTGTTATATCCTTTGAAGATTTGGGGCATCATGCCGGTTATTATAAGATTAAG
CATTCTCATGCTGCTAGGTTGTTCTATTTCTTCTTTGAATCACGCGGTAGTAAGGACGAT
CCTGTTGTCATCTGGTTGAGTGGAGGGCCTGGTTGCAGCAGTGAGTTGGCCCTTTTCTAT
GAAAATGGACCTTTCTCTATTTCAAATAATTTGTCACTTGTGCGGAATGAATATGGGTGG
GACAAGGTATCAAACCTTATCTATGTGGACCAACCTACAGGTACTGGCTTTAGTTACAGT
TCTGACAGACATGACATCCGTCACAGTGAAGCAGGTGTTAGCGACGACTTGTATGACTTC
CTACAGGCTTTCTTTGAAGAGCATCCTGAGCTTGTAAAGAATGACTTCTACATAACTGGA
GAATCATATGCTGGGCACTATATTCCTGCTTTTGCTGCTAGAGTACACAAGGGAAACAAG
GCTAAAGAAGGAATACATATAAACTTAAAGGGATTTGCCATTGGGAATGGGCTTACAGAT
CCCAAAATACAATACGCTGCGTATACTGACTATGCATTGGACATGGGATTAATTTCAAAG
TCTGATCATGATCGTATCAACAAAATACTTCCAGTTTGTGAAGTTGCAATAAACCTTTGT
GGTACTGATGGGAAAATCTCTTGCTTGGCTGCCTATTTTGTTTGCAATTCTATATTCTCT
GCTGTTCGTGCACGTGCTGGGGCTGACATCAATCATTACGACATCAGAAAGAAATGCGTT
GGAGCACTCTGCTATGACTTCTCAAACATGGAGAAATTGCTGAATATGCACTCTGTTAAG
CAGGCTCTTGGAGTTGAGGATATAGAGTTTGTCTCATGCAGCACTACTGTGTACCAGGCC
ATGCTTGTTGATTGGATGAGGAATCTTGAGGCTGGCATTCCAACCTTGCTCGAGGATGGA
ATAAAGTTGCTTGTTTATGCTGGAGAATATGATCTTATTTGCAACTGGCTTGGTAACTCA
AGATGGGTTCAGGCTATGGAATGGAGTGGTCAGAAAGAGTTTGTAGCATCTCCCGATGTT
CCTTTTGAAGTTGACAGTTCTGAAGCTGGATTGTTGAAAAGCCATGGGCCTCTGAGTTTC
CTGAAGGTTCACGATGCTGGACACATGGTTCCAATGGATCAACCTAAAGTTGCCTTAGAG
ATGCTCAAGAGGTGGATTGGAGGCACCCTTTCTCAGCAGACGACTGAGACTGAAGACTTG
GTCGCTTCAATATGA

Peptide Sequence

PEP ID

XP_016437155.1
PEP Infomation

PREDICTED: serine carboxypeptidase-like [Nicotiana tabacum]
Sequence

MAQMKLSLSLFLSLVLLLAFSPSSFAKVSISSKLASKQAEKLIHELNLFPKESDNIVDRD
PFPTAASRIVEKRFNFANLTNSSVISFEDLGHHAGYYKIKHSHAARLFYFFFESRGSKDD
PVVIWLSGGPGCSSELALFYENGPFSISNNLSLVRNEYGWDKVSNLIYVDQPTGTGFSYS
SDRHDIRHSEAGVSDDLYDFLQAFFEEHPELVKNDFYITGESYAGHYIPAFAARVHKGNK
AKEGIHINLKGFAIGNGLTDPKIQYAAYTDYALDMGLISKSDHDRINKILPVCEVAINLC
GTDGKISCLAAYFVCNSIFSAVRARAGADINHYDIRKKCVGALCYDFSNMEKLLNMHSVK
QALGVEDIEFVSCSTTVYQAMLVDWMRNLEAGIPTLLEDGIKLLVYAGEYDLICNWLGNS
RWVQAMEWSGQKEFVASPDVPFEVDSSEAGLLKSHGPLSFLKVHDAGHMVPMDQPKVALE
MLKRWIGGTLSQQTTETEDLVASI

Transcript Sequence

Gene sequence data has not been registered.